PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG033103.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bHLH
Protein Properties Length: 228aa    MW: 25333.4 Da    PI: 10.3231
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG033103.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.36.5e-1460106354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++h+++E +RR+riN+ f++Lr++lP++      K++Ka++Le++++++k+L
  CCG033103.1  60 KKHSMAESNRRSRINTQFATLRTILPNL-----IKVNKASVLEETIRCVKEL 106
                  68*************************9.....6****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.12657106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.7E-1160106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.27E-960111No hitNo description
Gene3DG3DSA:4.10.280.104.5E-1361115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-1361124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-963112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550212.24E-6145217No hitNo description
Gene3DG3DSA:3.30.70.2607.5E-7148217No hitNo description
CDDcd048736.59E-6148207No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MALRQIHDVQ PLSSHSNSAG TCSNQDDFRQ ALLNSINETT YNNSMTKQLI SEESKLVAAK  60
KHSMAESNRR SRINTQFATL RTILPNLIKV NKASVLEETI RCVKELTNTV SELKEIYGGG  120
RLECVFPGGA DKLRIGSCKG KGQEVVKVVF SCDDKRKLLS DVARAVRSVK GKVVRAEMVT  180
MGGRTKCVLW VQGINGNEEL EMLRRVLNAL TEKPNMARTC NRPKLTLL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011021839.11e-168PREDICTED: transcription factor bHLH131-like
SwissprotP0CB259e-45BH131_ARATH; Transcription factor bHLH131
TrEMBLB9HFR71e-159B9HFR7_POPTR; Uncharacterized protein
STRINGPOPTR_0007s14360.11e-158(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126113032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.13e-43bHLH family protein